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Reference - PMID:38133430 - Genetic suppressor screen identifies Tgp1 (glycerophosphocholine transporter), Kcs1 (IP 6 kinase), and Plc1 (phospholipase C) as determinants of inositol pyrophosphate toxicosis in fission yeast.

Reference summary

PubMed ID
PMID:38133430
Title
Genetic suppressor screen identifies Tgp1 (glycerophosphocholine transporter), Kcs1 (IP 6 kinase), and Plc1 (phospholipase C) as determinants of inositol pyrophosphate toxicosis in fission yeast.
Authors
Bednor L, Sanchez AM, Garg A, Shuman S, Schwer B
Citation
mBio 2023 Dec 22;:e0306223
Publication year
2023
Abstract
The inositol pyrophosphate metabolite 1,5-IP 8 governs repression of fission yeast phosphate homeostasis genes pho1 , pho84 , and tgp1 by lncRNA-mediated transcriptional interference. Asp1 pyrophosphatase mutations that increase IP 8 levels elicit precocious lncRNA termination, leading to derepression of the PHO genes. Deletions of the Asp1 pyrophosphatase domain result in growth impairment or lethality via IP 8 agonism of transcription termination. It was assumed that IP 8 toxicity ensues from dysregulation of essential genes. In this study, a suppressor screen revealed that IP 8 toxicosis of Asp1 pyrophosphatase mutants is caused by: (i) a >40-fold increase in the expression of the inessential tgp1 gene encoding a glycerophosphodiester transporter and (ii) the presence of glycerophosphocholine in the growth medium. The suppressor screen yielded missense mutations in two upstream enzymes of inositol polyphosphate metabolism: the phospholipase C enzyme Plc1 that generates IP 3 and the essential Kcs1 kinase that converts IP 6 to 5-IP 7 , the immediate precursor of IP 8 .

Annotation

Multi-locus phenotype

FYPO:0004481 - abolished cell population growth at high temperature

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FYPO:0005369 - abolished cell population growth at low temperature

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FYPO:0001045 - decreased acid phosphatase activity

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0000080 - decreased cell population growth at low temperature

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FYPO:0002243 - increased acid phosphatase activity

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FYPO:0003267 - normal acid phosphatase activity

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FYPO:0000674 - normal cell population growth at high temperature

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FYPO:0002141 - normal cell population growth at low temperature

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FYPO:0001357 - normal vegetative cell population growth

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Single locus phenotype

FYPO:0004481 - abolished cell population growth at high temperature

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FYPO:0005369 - abolished cell population growth at low temperature

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FYPO:0001045 - decreased acid phosphatase activity

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0002243 - increased acid phosphatase activity

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0002141 - normal cell population growth at low temperature

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FYPO:0002085 - normal vegetative cell growth

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FYPO:0001357 - normal vegetative cell population growth

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