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Reference - PMID:38376141 - Disordered regions and folded modules in CAF-1 promote histone deposition in Schizosaccharomyces pombe .

Reference summary

PubMed ID
PMID:38376141
Title
Disordered regions and folded modules in CAF-1 promote histone deposition in Schizosaccharomyces pombe .
Authors
Ouasti F, Audin M, Fréon K, Quivy JP, Tachekort M, Cesard E, Thureau A, Ropars V, Fernández Varela P, Moal G, Soumana-Amadou I, Uryga A, Legrand P, Andreani J, Guerois R, Almouzni G, Lambert S, Ochsenbein F
Citation
Elife 2024 Feb 20;12
Publication year
2024
Abstract
Genome and epigenome integrity in eukaryotes depends on the proper coupling of histone deposition with DNA synthesis. This process relies on the evolutionary conserved histone chaperone CAF-1 for which the links between structure and functions are still a puzzle. While studies of the Saccharomyces cerevisiae CAF-1 complex enabled to propose a model for the histone deposition mechanism, we still lack a framework to demonstrate its generality and in particular, how its interaction with the polymerase accessory factor PCNA is operating. Here, we reconstituted a complete Sp CAF-1 from fission yeast. We characterized its dynamic structure using NMR, SAXS and molecular modeling together with in vitro and in vivo functional studies on rationally designed interaction mutants. Importantly, we identify the unfolded nature of the acidic domain which folds up when binding to histones. We also show how the long KER helix mediates DNA binding and stimulates Sp CAF-1 association with PCNA. Our study highlights how the organization of CAF-1 comprising both disordered regions and folded modules enables the dynamics of multiple interactions to promote synthesis-coupled histone deposition essential for its DNA replication, heterochromatin maintenance, and genome stability functions.

Annotation

GO cellular component

GO:0005634 - nucleus

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GO molecular function

GO:0000510 - H3-H4 histone complex chaperone activity

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Multi-locus phenotype

FYPO:0000278 - decreased cell population growth following spore germination

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FYPO:0002150 - inviable spore population

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Single locus phenotype

FYPO:0007160 - abnormal DNA replication-dependent nucleosome assembly

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FYPO:0000705 - abolished protein-protein interaction

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0005018 - decreased double-stranded DNA binding

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FYPO:0007158 - decreased histone H3 binding

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FYPO:0007159 - decreased histone H4 binding

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FYPO:0002624 - decreased punctate nuclear protein localization

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FYPO:0004709 - increased number of Rad52 foci

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FYPO:0001571 - increased protein-protein interaction

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FYPO:0005116 - increased punctate nuclear protein localization

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FYPO:0004742 - normal chromatin silencing at centromere outer repeat

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FYPO:0007542 - normal double-stranded DNA binding

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FYPO:0008272 - normal histone H3 binding

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FYPO:0008273 - normal histone H4 binding

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FYPO:0007328 - normal number of Rad52 foci during vegetative growth

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FYPO:0000703 - normal protein-protein interaction

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FYPO:0004910 - normal punctate nuclear protein localization

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