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Reference - PMID:38718864 - H2B oncohistones cause homologous recombination defect and genomic instability through reducing H2B monoubiquitination in Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:38718864
Title
H2B oncohistones cause homologous recombination defect and genomic instability through reducing H2B monoubiquitination in Schizosaccharomyces pombe.
Authors
Qin B, Lu G, Chen X, Zheng C, Lin H, Liu Q, Shang J, Feng G
Citation
J Biol Chem 2024 May 06;:107345
Publication year
2024
Abstract
Canonical oncohistones are histone H3 mutations in the N-terminal tail associated with tumors and affect gene expression by altering H3 post-translational modifications (PTMs) and the epigenetic landscape. Noncanonical oncohistone mutations occur in both tails and globular domains of all 4 core histones and alter gene expression by perturbing chromatin remodeling. However, the effects and mechanisms of noncanonical oncohistones remain largely unknown. Here we characterized 16 noncanonical H2B oncohistones in the fission yeast Schizosaccharomyces pombe. We found that 7 of them exhibited temperature sensitivities and 11 exhibited genotoxic sensitivities. A detailed study of 2 of these onco-mutants H2BG52D and H2BP102L revealed that they were defective in homologous recombination (HR) repair with compromised histone eviction and Rad51 recruitment. Interestingly, their genotoxic sensitivities and HR defects were rescued by inactivation of the H2BK119 deubiquitination function of Ubp8 in the Spt-Ada-Gcn5-Acetyltransferase (SAGA) complex. The levels of H2BK119 monoubiquitination (H2Bub) in the H2BG52D and H2BP102L mutants are reduced in global and local DNA break sites presumably due to enhanced recruitment of Ubp8 onto nucleosomes, and are recovered upon loss of H2B deubiquitination function of the SAGA complex. Moreover, H2BG52D and H2BP102L heterozygotes exhibit genotoxic sensitivities and reduced H2Bub in cis. We therefore conclude that H2BG52D and H2BP102L oncohistones affect HR repair and genome stability via reduction of H2Bub and propose that other noncanonical oncohistones may also affect histone PTMs to cause diseases.

Annotation

Multi-locus phenotype

FYPO:0002922 - abolished histone H2B-K119 ubiquitination during vegetative growth

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Genotypes:

FYPO:0000082 - decreased cell population growth at high temperature

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Genotypes:

FYPO:0003912 - decreased double-strand break repair via homologous recombination

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Genotypes:

FYPO:0007386 - decreased histone H2B-K119 ubiquitination during vegetative growth

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0000674 - normal cell population growth at high temperature

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FYPO:0000969 - normal growth during cellular response to UV

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FYPO:0003906 - normal growth on bleomycin

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FYPO:0000957 - normal growth on methyl methanesulfonate

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FYPO:0003183 - normal growth on phleomycin

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Genotypes:

FYPO:0002923 - normal histone H2B-K119 ubiquitination during vegetative growth

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Genotypes:

FYPO:0001357 - normal vegetative cell population growth

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FYPO:0004752 - resistance to phleomycin

Genes:

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FYPO:0009010 - resistance to UV during vegetative growth

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Genotypes:

FYPO:0000095 - sensitive to bleomycin

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FYPO:0000085 - sensitive to camptothecin

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0002344 - sensitive to phleomycin

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FYPO:0000268 - sensitive to UV during vegetative growth

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Single locus phenotype

FYPO:0002922 - abolished histone H2B-K119 ubiquitination during vegetative growth

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FYPO:0003486 - abolished protein localization to double-strand break site

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0002340 - decreased DNA recombination during vegetative growth

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FYPO:0005159 - decreased DNA synthesis involved in mitotic DNA replication

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FYPO:0003912 - decreased double-strand break repair via homologous recombination

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FYPO:0005608 - decreased histone H2B-K119 ubiquitination at double-strand break site during vegetative growth

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Genotypes:

FYPO:0007386 - decreased histone H2B-K119 ubiquitination during vegetative growth

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FYPO:0005677 - decreased number of Rad52 foci during mitotic S phase

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0007881 - increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate

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FYPO:0008439 - increased histone H2B-K119 ubiquitination during vegetative growth

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Genotypes:

FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0004066 - increased protein localization to chromatin at protein coding gene

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FYPO:0002475 - increased protein localization to double-strand break site

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FYPO:0004557 - increased vegetative cell population growth

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Genotypes:

FYPO:0000674 - normal cell population growth at high temperature

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Genotypes:

FYPO:0000969 - normal growth during cellular response to UV

Genes:

Genotypes:

FYPO:0003906 - normal growth on bleomycin

Genes:

Genotypes:

FYPO:0001690 - normal growth on camptothecin

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FYPO:0000963 - normal growth on hydroxyurea

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Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

Genes:

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FYPO:0007074 - normal growth on mycophenolic acid

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FYPO:0003183 - normal growth on phleomycin

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FYPO:0000964 - normal growth on thiabendazole

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FYPO:0002923 - normal histone H2B-K119 ubiquitination during vegetative growth

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FYPO:0008250 - normal protein localization to chromatin at protein coding gene

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Genotypes:

FYPO:0001357 - normal vegetative cell population growth

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FYPO:0009031 - resistance to bleomycin

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FYPO:0002578 - resistance to hydroxyurea

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FYPO:0000725 - resistance to methyl methanesulfonate

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FYPO:0004752 - resistance to phleomycin

Genes:

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FYPO:0000069 - resistance to thiabendazole

Genes:

Genotypes:

FYPO:0009010 - resistance to UV during vegetative growth

Genes:

Genotypes:

FYPO:0000095 - sensitive to bleomycin

Genes:

Genotypes:

FYPO:0000085 - sensitive to camptothecin

Genes:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

Genes:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

Genes:

Genotypes:

FYPO:0003670 - sensitive to mycophenolic acid

Genes:

Genotypes:

FYPO:0002344 - sensitive to phleomycin

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Genotypes: