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Reference - PMID:39094570 - A replisome-associated histone H3-H4 chaperone required for epigenetic inheritance.

Reference summary

PubMed ID
PMID:39094570
Title
A replisome-associated histone H3-H4 chaperone required for epigenetic inheritance.
Authors
Yu J, Zhang Y, Fang Y, Paulo JA, Yaghoubi D, Hua X, Shipkovenska G, Toda T, Zhang Z, Gygi SP, Jia S, Li Q, Moazed D
Citation
Cell 2024 Sep 05;187(18):5010-5028.e24
Publication year
2024
Abstract
Faithful transfer of parental histones to newly replicated daughter DNA strands is critical for inheritance of epigenetic states. Although replication proteins that facilitate parental histone transfer have been identified, how intact histone H3-H4 tetramers travel from the front to the back of the replication fork remains unknown. Here, we use AlphaFold-Multimer structural predictions combined with biochemical and genetic approaches to identify the Mrc1/CLASPIN subunit of the replisome as a histone chaperone. Mrc1 contains a conserved histone-binding domain that forms a brace around the H3-H4 tetramer mimicking nucleosomal DNA and H2A-H2B histones, is required for heterochromatin inheritance, and promotes parental histone recycling during replication. We further identify binding sites for the FACT histone chaperone in Swi1/TIMELESS and DNA polymerase α that are required for heterochromatin inheritance. We propose that Mrc1, in concert with FACT acting as a mobile co-chaperone, coordinates the distribution of parental histones to newly replicated DNA.

Annotation

GO biological process

GO:0006335 - DNA replication-dependent chromatin assembly

Genes:

GO:0040029 - epigenetic regulation of gene expression

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GO molecular function

GO:0000510 - H3-H4 histone complex chaperone activity

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Multi-locus phenotype

FYPO:0004745 - abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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Single locus phenotype

FYPO:0007477 - abnormal epigenetic heterochromatin inheritance

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FYPO:0007472 - abnormal histone exchange

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FYPO:0007598 - abolished chromatin silencing at ectopic tethering site

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FYPO:0007376 - abolished epigenetic heterochromatin inheritance

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FYPO:0008454 - decreased chromatin silencing at ectopic tethering site

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FYPO:0007478 - decreased epigenetic heterochromatin inheritance

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FYPO:0007158 - decreased histone H3 binding

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FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0007159 - decreased histone H4 binding

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FYPO:0001645 - decreased protein-protein interaction

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FYPO:0007599 - increased chromatin silencing at ectopic tethering site

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FYPO:0007479 - normal epigenetic heterochromatin inheritance

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FYPO:0000963 - normal growth on hydroxyurea

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FYPO:0008272 - normal histone H3 binding

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FYPO:0008273 - normal histone H4 binding

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FYPO:0000703 - normal protein-protein interaction

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FYPO:0000088 - sensitive to hydroxyurea

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