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Reference - PMID:39761853 - Regulation of sod1 mRNA and protein abundance by zinc in fission yeast is dependent on the CCR4-NOT complex.

Reference summary

PubMed ID
PMID:39761853
Title
Regulation of sod1 mRNA and protein abundance by zinc in fission yeast is dependent on the CCR4-NOT complex.
Authors
Weeks AT, Bird AJ
Citation
J Biol Chem 2025 Jan 04;:108156
Publication year
2025
Abstract
Zinc is an essential micronutrient that serves as a cofactor in a wide variety of enzymes, including Cu-Zn Superoxide Dismutase 1 (Sod1). We have discovered in Schizosaccharomyces pombe that Sod1 mRNA and protein levels are regulated in response to cellular zinc availability. We demonstrate that lower levels of Sod1 mRNA and protein accumulate under low zinc conditions, and that this regulation does not require the sod1 promoter or known factors that regulate transcription of sod1 in response to zinc and other environmental stresses. Further analyses using yeast deletion strains and an inactive allele of Caf1 revealed that the reduced accumulation of sod1 mRNA and protein under low zinc conditions depends on the Caf1 and Ccr4 deadenylases of the CCR4-NOT complex. We also found that Caf1 and Ccr4 are both required for growth under zinc-limiting conditions. To gain additional mechanistic insight we used immunoblot analysis to map the regions required for the regulation of the Sod1 protein by zinc. We found that the sod1 ORF and 3'UTR are both necessary and sufficient for the zinc-dependent changes in Sod1 protein abundance. Collectively, our studies reveal a novel mechanism of altering mRNA and protein abundance in response to zinc status, which depends on the CCR4-NOT complex.

Annotation

GO biological process

GO:0010629 - negative regulation of gene expression

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Qualitative gene expression

PomGeneEx:0000019 - protein level decreased

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PomGeneEx:0000012 - RNA level decreased

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Single locus phenotype

FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0001551 - increased protein level during cellular response to zinc ion starvation

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FYPO:0005291 - increased RNA level during cellular response to zinc ion

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FYPO:0001547 - increased RNA level during cellular response to zinc ion starvation

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FYPO:0008442 - normal growth on ethylenediaminetetraacetic acid

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FYPO:0003507 - normal growth on zinc

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FYPO:0008441 - normal protein level during cellular response to replete zinc

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FYPO:0007054 - normal protein level during cellular response to zinc ion starvation

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FYPO:0006830 - normal RNA level during cellular response to replete zinc

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FYPO:0006829 - normal RNA level during cellular response to zinc ion starvation

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FYPO:0007928 - sensitive to ethylenediaminetetraacetic acid

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FYPO:0000116 - sensitive to zinc

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