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Reference - PMID:41258116 - TORC2 inactivation promotes heterochromatin formation in rDNA and prolongs viability of quiescent fission yeast cells.

Reference summary

PubMed ID
PMID:41258116
Title
TORC2 inactivation promotes heterochromatin formation in rDNA and prolongs viability of quiescent fission yeast cells.
Authors
Hirai H, Ohta K
Citation
Commun Biol 2025 Nov 19;8(1):1606
Publication year
2025
Abstract
A large amount of the energy produced by glucose is consumed in the biogenesis of ribosomes, the cellular machinery for protein synthesis. Recent studies suggest that a low-calorie diet and the suppression of ribosome biogenesis can extend lifespan. However, the molecular mechanisms underlying these phenomena remain elusive. Here, we demonstrate that TORC2 (TOR complex 2) promotes ribosomal RNA (rRNA) transcription by facilitating the association of Paf1C (RNA polymerase II-associated factor 1 complex) with the rDNA region. Under glucose starvation, inactivation of the TORC2-Gad8 pathway leads to the dissociation of Paf1C from rDNA, thereby promoting heterochromatin formation and transcriptional repression. This mechanism is distinct from TORC1-mediated gene regulation of rDNA. Additionally, simultaneous inactivation of the redundant TORC1 and TORC2 pathways in nutrient-rich conditions leads to robust rDNA heterochromatin formation and rRNA transcriptional suppression, which is associated with prolonged viability of quiescent cells. This extension of viability is attenuated by the disruption of the H3K9 methyltransferase Clr4. These results suggest that robust heterochromatin formation in the rDNA region may support sustained survival of quiescent cells.

Annotation

GO biological process

GO:0061188 - negative regulation of rDNA heterochromatin formation

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GO cellular component

GO:0030874 - nucleolar chromatin

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Multi-locus phenotype

FYPO:0006470 - decreased mature rRNA level

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FYPO:0006074 - increased histone H3-K9 dimethylation at rDNA during vegetative growth

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FYPO:0001309 - increased viability in stationary phase

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Single locus phenotype

FYPO:0010028 - abolished histone H3-K9 dimethylation at rDNA during vegetative growth

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FYPO:0006470 - decreased mature rRNA level

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FYPO:0002391 - decreased protein localization to chromatin at rDNA

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FYPO:0006494 - decreased rDNA copy number during vegetative growth

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FYPO:0003601 - decreased rRNA precursor level

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FYPO:0004009 - decreased rRNA transcription

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FYPO:0006074 - increased histone H3-K9 dimethylation at rDNA during vegetative growth

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FYPO:0006077 - increased histone H3-K9 methylation at rDNA during vegetative growth

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FYPO:0004032 - increased protein localization to chromatin at rDNA

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FYPO:0001309 - increased viability in stationary phase

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FYPO:0010029 - normal histone H3-K9 dimethylation at rDNA during vegetative growth

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FYPO:0002625 - normal protein localization to chromatin rDNA

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FYPO:0001310 - normal viability in stationary phase

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