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Phenotype ontology term - FYPO:0000825 - increased RNA level during vegetative growth

Term summary

ID
FYPO:0000825
Name
increased RNA level during vegetative growth
Ontology or CV name
Phenotype
Definition
A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.

Parents

Annotation

Multi-locus phenotype

FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0003557 - increased antisense RNA level

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FYPO:0007339 - increased cen-dg RNA level

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FYPO:0004689 - increased cenH-derived RNA level

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0002836 - increased centromeric outer repeat transcript-derived siRNA level

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FYPO:0004982 - increased centromeric transcript level

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FYPO:0005522 - increased forward centromeric outer repeat transcript level

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FYPO:0002960 - increased level of DSR-containing meiotic gene mRNA during vegetative growth

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FYPO:0005005 - increased level of hexose transport gene mRNA during vegetative growth

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FYPO:0006413 - increased level of histone gene mRNA during vegetative growth

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FYPO:0005420 - increased level of iron assimilation gene mRNA during vegetative growth

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FYPO:0005127 - increased level of late meiotic gene mRNA during vegetative growth

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FYPO:0002173 - increased level of meiotic gene mRNA during vegetative growth

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FYPO:0002172 - increased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0007093 - increased level of ribosomal protein gene mRNA during vegetative growth

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FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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FYPO:0002989 - increased level of transmembrane transport gene mRNA during vegetative growth

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FYPO:0005995 - increased lncRNA level

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FYPO:0004342 - increased LTR-derived RNA level

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FYPO:0003424 - increased mitochondrial RNA level

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FYPO:0008146 - increased ncRNA level during vegetative growth

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FYPO:0003119 - increased nuclear polyadenylated mRNA level during vegetative growth

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FYPO:0001908 - increased pre-mRNA level

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FYPO:0005523 - increased reverse centromeric outer repeat transcript level

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FYPO:0006078 - increased ribosomal RNA-derived siRNA level

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FYPO:0001456 - increased RNA level during cellular response to endoplasmic reticulum stress

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FYPO:0005163 - increased RNA level during cellular response to heat

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FYPO:0004571 - increased RNA level during cellular response to hydrogen peroxide

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FYPO:0004191 - increased RNA level during cellular response to hydroxyurea

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FYPO:0002014 - increased RNA level during cellular response to iron ion starvation

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FYPO:0005162 - increased RNA level during cellular response to salt stress

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FYPO:0007085 - increased RNA level during cellular response to sulfur starvation

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FYPO:0006110 - increased silent mating-type cassette transcript-derived siRNA level

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FYPO:0004207 - increased siRNA level

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FYPO:0005917 - increased subtelomeric heterochromatin RNA level

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FYPO:0004573 - increased telomeric transcript level

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FYPO:0003752 - increased total nuclear polyadenylated mRNA level during vegetative growth

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FYPO:0006849 - increased total RNA level during vegetative growth

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FYPO:0003105 - increased transposable element-derived small RNA level

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Single locus phenotype

FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0007064 - increased 22S rRNA precursor level

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FYPO:0007063 - increased 23S rRNA precursor level

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FYPO:0001136 - increased 27S rRNA precursor level

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FYPO:0001135 - increased 35S rRNA precursor level

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FYPO:0003557 - increased antisense RNA level

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FYPO:0007339 - increased cen-dg RNA level

References:

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FYPO:0004689 - increased cenH-derived RNA level

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FYPO:0006353 - increased centromere central core transcript level

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FYPO:0008176 - increased centromeric inner repeat transcript level

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0002836 - increased centromeric outer repeat transcript-derived siRNA level

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FYPO:0004982 - increased centromeric transcript level

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FYPO:0008148 - increased CUT RNA level

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FYPO:0007345 - increased euchromatin-derived RNA level

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FYPO:0005522 - increased forward centromeric outer repeat transcript level

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FYPO:0001979 - increased lariat intron level

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FYPO:0004489 - increased level of amino acid biosynthesis gene mRNA during vegetative growth

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FYPO:0004389 - increased level of amino acid catabolism gene mRNA during vegetative growth

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FYPO:0002743 - increased level of amino acid metabolism gene mRNA during vegetative growth

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FYPO:0004390 - increased level of arginine catabolism gene mRNA during vegetative growth

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FYPO:0006783 - increased level of carbohydrate metabolism gene mRNA during vegetative growth

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FYPO:0005301 - increased level of cell cycle regulated gene mRNA during vegetative growth

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FYPO:0005505 - increased level of cell surface glycoprotein gene mRNA during vegetative growth

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FYPO:0006597 - increased level of cell wall organization gene mRNA during vegetative growth

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FYPO:0002960 - increased level of DSR-containing meiotic gene mRNA during vegetative growth

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FYPO:0006596 - increased level of flocculin gene mRNA during vegetative growth

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FYPO:0004896 - increased level of generation of precursor metabolites and energy gene mRNA during vegetative growth

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FYPO:0005279 - increased level of glucose-repressed gene mRNA during vegetative growth

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FYPO:0005129 - increased level of heat shock gene mRNA during vegetative growth

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FYPO:0005005 - increased level of hexose transport gene mRNA during vegetative growth

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FYPO:0006414 - increased level of histone gene mRNA during mitotic interphase

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FYPO:0006422 - increased level of histone gene mRNA during mitotic S phase

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FYPO:0006413 - increased level of histone gene mRNA during vegetative growth

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FYPO:0005420 - increased level of iron assimilation gene mRNA during vegetative growth

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FYPO:0002742 - increased level of iron transport gene mRNA during vegetative growth

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FYPO:0006155 - increased level of mating gene mRNA during vegetative growth

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FYPO:0002173 - increased level of meiotic gene mRNA during vegetative growth

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FYPO:0005128 - increased level of middle meiotic gene mRNA during vegetative growth

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FYPO:0002587 - increased level of mitochondrial polycistronic RNA precursors

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FYPO:0005506 - increased level of mitochondrial transport gene mRNA during vegetative growth

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FYPO:0002590 - increased level of mitochondrial tRNA processing intermediates with 3' extensions

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FYPO:0002172 - increased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0002581 - increased level of nuclear tRNA processing intermediates with 3' extensions

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FYPO:0006154 - increased level of pheromone response gene mRNA during vegetative growth

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FYPO:0007407 - increased level of phosphate starvation gene mRNA during vegetative growth

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FYPO:0004388 - increased level of pyrimidine salvage gene mRNA during vegetative growth

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FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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FYPO:0002989 - increased level of transmembrane transport gene mRNA during vegetative growth

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FYPO:0004490 - increased level of transport gene mRNA during vegetative growth

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FYPO:0005995 - increased lncRNA level

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FYPO:0004342 - increased LTR-derived RNA level

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FYPO:0006075 - increased mature 25S rRNA level

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FYPO:0003675 - increased mature 5.8SL rRNA level

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FYPO:0005507 - increased mature rRNA level

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FYPO:0002564 - increased mature tRNA level during vegetative growth

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FYPO:0006446 - increased mitochondrial pre-mRNA level

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FYPO:0003424 - increased mitochondrial RNA level

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FYPO:0003104 - increased mRNA-derived small RNA level

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FYPO:0003119 - increased nuclear polyadenylated mRNA level during vegetative growth

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FYPO:0000911 - increased nuclear RNA level during vegetative growth

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FYPO:0004678 - increased polyadenylated 25S rRNA level

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FYPO:0008100 - increased polyadenylated 5S rRNA level during cellular response to phosphate starvation

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FYPO:0001908 - increased pre-mRNA level

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FYPO:0006749 - increased pre-tRNA level during vegetative growth

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FYPO:0004815 - increased rDNA antisense siRNA level

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FYPO:0008150 - increased rDNA intergenic repeat RNA level

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FYPO:0003558 - increased repeat element RNA level

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FYPO:0005523 - increased reverse centromeric outer repeat transcript level

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FYPO:0001242 - increased RNA level during cellular response to adenine starvation

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FYPO:0004647 - increased RNA level during cellular response to copper ion

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FYPO:0001456 - increased RNA level during cellular response to endoplasmic reticulum stress

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FYPO:0004571 - increased RNA level during cellular response to hydrogen peroxide

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FYPO:0004191 - increased RNA level during cellular response to hydroxyurea

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FYPO:0002014 - increased RNA level during cellular response to iron ion starvation

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FYPO:0007118 - increased RNA level during cellular response to leucine starvation

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FYPO:0004785 - increased RNA level during cellular response to menadione

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FYPO:0002985 - increased RNA level during cellular response to methyl methanesulfonate

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FYPO:0001279 - increased RNA level during cellular response to oxidative stress

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FYPO:0006270 - increased RNA level during cellular response to phosphate starvation

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FYPO:0001685 - increased RNA level during cellular response to purvalanol A

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FYPO:0001573 - increased RNA level during cellular response to rapamycin

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FYPO:0007085 - increased RNA level during cellular response to sulfur starvation

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FYPO:0001243 - increased RNA level during cellular response to thiamine

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FYPO:0005291 - increased RNA level during cellular response to zinc ion

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FYPO:0001547 - increased RNA level during cellular response to zinc ion starvation

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FYPO:0006542 - increased RNA level during mitosis

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FYPO:0004934 - increased RNA level during mitotic G1 phase

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FYPO:0006562 - increased RNA level during mitotic G2 phase

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FYPO:0007050 - increased RNA level during stress response to zinc ion

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FYPO:0003600 - increased rRNA precursor level

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FYPO:0006110 - increased silent mating-type cassette transcript-derived siRNA level

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FYPO:0004207 - increased siRNA level

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FYPO:0003700 - increased snoRNA primary transcript level

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FYPO:0005978 - increased spliced cen-dg RNA level

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FYPO:0003908 - increased stress response gene antisense RNA level

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FYPO:0005917 - increased subtelomeric heterochromatin RNA level

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FYPO:0006109 - increased subtelomeric transcript-derived siRNA level

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FYPO:0004573 - increased telomeric transcript level

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FYPO:0003752 - increased total nuclear polyadenylated mRNA level during vegetative growth

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FYPO:0006849 - increased total RNA level during vegetative growth

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FYPO:0003105 - increased transposable element-derived small RNA level

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FYPO:0004343 - increased wtf-derived RNA level

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