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Phenotype ontology term - FYPO:0000853 - abnormal nucleosome positioning

Term summary

ID
FYPO:0000853
Name
abnormal nucleosome positioning
Ontology or CV name
Phenotype
Definition
A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.

Parents

Annotation

Multi-locus phenotype

FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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FYPO:0004491 - decreased nucleosome occupancy

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FYPO:0005951 - decreased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0007837 - decreased nucleosome occupancy at subtelomere

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FYPO:0010065 - decreased nucleosome occupancy at transcription regulatory region

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FYPO:0005516 - decreased nucleosome occupancy in euchromatin

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FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

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Single locus phenotype

FYPO:0000853 - abnormal nucleosome positioning

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FYPO:0003812 - abnormal nucleosome positioning at stress response genes

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FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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FYPO:0000855 - abnormal nucleosome positioning in heterochromatin

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FYPO:0004491 - decreased nucleosome occupancy

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FYPO:0005915 - decreased nucleosome occupancy at 5S rRNA genes

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FYPO:0005524 - decreased nucleosome occupancy at centromere central core

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FYPO:0005525 - decreased nucleosome occupancy at centromere inner repeat

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FYPO:0008151 - decreased nucleosome occupancy at centromeric heterochromatin

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FYPO:0005951 - decreased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0005931 - decreased nucleosome occupancy at silent mating-type cassette

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FYPO:0007837 - decreased nucleosome occupancy at subtelomere

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FYPO:0005916 - decreased nucleosome occupancy at tRNA genes

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FYPO:0005516 - decreased nucleosome occupancy in euchromatin

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FYPO:0008341 - decreased nucleosome occupancy in gene body

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FYPO:0007655 - increased nucleosome occupancy

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FYPO:0008036 - increased nucleosome occupancy at CENP-A boundary

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FYPO:0003909 - increased nucleosome occupancy at CRE site

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FYPO:0006309 - increased nucleosome occupancy at FLEX element

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FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0006741 - increased nucleosome occupancy at MCB promoters

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FYPO:0007836 - increased nucleosome occupancy at subtelomere

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FYPO:0007656 - increased nucleosome occupancy at transcription start site

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