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Phenotype ontology term - FYPO:0001117 - decreased RNA level during vegetative growth

Term summary

ID
FYPO:0001117
Name
decreased RNA level during vegetative growth
Ontology or CV name
Phenotype
Definition
A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.

Parents

Annotation

Multi-locus phenotype

FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

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FYPO:0004816 - decreased antisense RNA level

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FYPO:0003094 - decreased centromeric outer repeat transcript level

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FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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FYPO:0004906 - decreased level of histone gene mRNA during vegetative growth

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FYPO:0004880 - decreased level of lipid metabolism gene mRNA during vegetative growth

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FYPO:0005187 - decreased level of transport gene mRNA during vegetative growth

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FYPO:0001137 - decreased mature 25S rRNA level

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FYPO:0006470 - decreased mature rRNA level

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FYPO:0002932 - decreased mature snoRNA level

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FYPO:0002583 - decreased mature tRNA level during vegetative growth

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FYPO:0003423 - decreased mitochondrial RNA level

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FYPO:0003103 - decreased mRNA-derived small RNA level

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FYPO:0008342 - decreased pre-tRNA or mature level during vegetative growth

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FYPO:0002287 - decreased RNA level during cellular response to heat

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FYPO:0001116 - decreased RNA level during cellular response to hydrogen peroxide

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FYPO:0002975 - decreased RNA level during cellular response to hydroxyurea

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FYPO:0003142 - decreased RNA level during cellular response to methyl methanesulfonate

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FYPO:0001280 - decreased RNA level during cellular response to oxidative stress

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FYPO:0004416 - decreased RNA level during cellular response to phosphate starvation

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FYPO:0002304 - decreased RNA level during cellular response to salt stress

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FYPO:0007084 - decreased RNA level during cellular response to sulfur starvation

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FYPO:0003034 - decreased RNA level during cellular response to UV

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FYPO:0006334 - decreased RNA level during cellular response to zinc ion starvation

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FYPO:0008424 - decreased silent mating-type cassette transcript-derived siRNA level

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FYPO:0003236 - decreased transposable element-derived small RNA level

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FYPO:0008156 - RNA absent from cell during cellular response to glucose starvation

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FYPO:0004052 - RNA absent from cell during cellular response to hydrogen peroxide

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FYPO:0003162 - RNA absent from cell during cellular response to salt stress

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FYPO:0003161 - RNA absent from cell during vegetative growth

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FYPO:0006076 - siRNA absent from cell

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Single locus phenotype

FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0007065 - 20S rRNA precursor absent from cell

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FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

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FYPO:0000273 - centromeric outer repeat transcripts absent

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FYPO:0003398 - decreased 32S rRNA precursor level

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FYPO:0003397 - decreased 35S rRNA precursor level

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FYPO:0008211 - decreased antisense RNA level during heat stress

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FYPO:0006362 - decreased borderline-derived siRNA level

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FYPO:0003094 - decreased centromeric outer repeat transcript level

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FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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FYPO:0004713 - decreased level of amino acid biosynthesis gene mRNA during vegetative growth

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FYPO:0004714 - decreased level of amino acid import gene mRNA during vegetative growth

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FYPO:0005946 - decreased level of cell cycle regulated gene mRNA during vegetative growth

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FYPO:0004903 - decreased level of cell separation after cytokinesis gene mRNA during vegetative growth

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FYPO:0005090 - decreased level of cytokinesis gene mRNA during vegetative growth

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FYPO:0005826 - decreased level of generation of precursor metabolites and energy gene mRNA during vegetative growth

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FYPO:0006412 - decreased level of histone gene mRNA during mitotic S phase

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FYPO:0004906 - decreased level of histone gene mRNA during vegetative growth

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FYPO:0005654 - decreased level of iron assimilation gene mRNA during vegetative growth

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FYPO:0004905 - decreased level of iron homeostasis gene mRNA during vegetative growth

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FYPO:0005580 - decreased level of lipid metabolism gene mRNA during cellular response to hypoxia

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FYPO:0004880 - decreased level of lipid metabolism gene mRNA during vegetative growth

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FYPO:0004878 - decreased level of mitotically up-regulated gene mRNA during vegetative growth

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FYPO:0004897 - decreased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0004712 - decreased level of nucleotide metabolism gene mRNA during vegetative growth

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FYPO:0004971 - decreased level of stress responsive gene mRNA during cellular response to phosphate starvation

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FYPO:0005908 - decreased level of stress responsive gene mRNA during vegetative growth

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FYPO:0004711 - decreased level of translation gene mRNA during vegetative growth

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FYPO:0005187 - decreased level of transport gene mRNA during vegetative growth

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FYPO:0008248 - decreased LTR-derived RNA level

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FYPO:0003694 - decreased mature 18S rRNA level

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FYPO:0001137 - decreased mature 25S rRNA level

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FYPO:0001138 - decreased mature 5.8S rRNA level

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FYPO:0002584 - decreased mature mitochondrial tRNA level

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FYPO:0006466 - decreased mature ncRNA level

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FYPO:0006470 - decreased mature rRNA level

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FYPO:0002932 - decreased mature snoRNA level

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FYPO:0004204 - decreased mature snRNA level

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FYPO:0002583 - decreased mature tRNA level during vegetative growth

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FYPO:0003423 - decreased mitochondrial RNA level

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FYPO:0003103 - decreased mRNA-derived small RNA level

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FYPO:0004681 - decreased polyadenylated 5.8S rRNA level

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FYPO:0002937 - decreased pre-mRNA level

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FYPO:0006748 - decreased pre-tRNA level during vegetative growth

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FYPO:0008342 - decreased pre-tRNA or mature level during vegetative growth

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FYPO:0004817 - decreased rDNA antisense small RNA level

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FYPO:0005685 - decreased RNA level during cellular response to cadmium ion

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FYPO:0004477 - decreased RNA level during cellular response to calcium ion

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FYPO:0004071 - decreased RNA level during cellular response to copper ion during vegetative growth

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FYPO:0006210 - decreased RNA level during cellular response to copper ion starvation during spore germination

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FYPO:0003280 - decreased RNA level during cellular response to copper ion starvation during vegetative growth

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FYPO:0004134 - decreased RNA level during cellular response to diethyl maleate

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FYPO:0002623 - decreased RNA level during cellular response to glucose stimulus

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FYPO:0002287 - decreased RNA level during cellular response to heat

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FYPO:0001116 - decreased RNA level during cellular response to hydrogen peroxide

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FYPO:0002975 - decreased RNA level during cellular response to hydroxyurea

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FYPO:0001259 - decreased RNA level during cellular response to hypoxia

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FYPO:0004192 - decreased RNA level during cellular response to ionizing radiation

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FYPO:0002042 - decreased RNA level during cellular response to iron ion starvation

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FYPO:0007117 - decreased RNA level during cellular response to leucine starvation

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FYPO:0003993 - decreased RNA level during cellular response to menadione

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FYPO:0003142 - decreased RNA level during cellular response to methyl methanesulfonate

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FYPO:0004349 - decreased RNA level during cellular response to methylglyoxal

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FYPO:0003377 - decreased RNA level during cellular response to nitrosative stress

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FYPO:0002305 - decreased RNA level during cellular response to non-ionic osmotic stress

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FYPO:0002286 - decreased RNA level during cellular response to osmotic stress

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FYPO:0001280 - decreased RNA level during cellular response to oxidative stress

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FYPO:0004416 - decreased RNA level during cellular response to phosphate starvation

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FYPO:0001684 - decreased RNA level during cellular response to purvalanol A

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FYPO:0002304 - decreased RNA level during cellular response to salt stress

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FYPO:0007084 - decreased RNA level during cellular response to sulfur starvation

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FYPO:0001244 - decreased RNA level during cellular response to thiamine starvation

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FYPO:0003034 - decreased RNA level during cellular response to UV

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FYPO:0001546 - decreased RNA level during cellular response to zinc ion

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FYPO:0006334 - decreased RNA level during cellular response to zinc ion starvation

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FYPO:0004935 - decreased RNA level during exit from mitosis

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FYPO:0005302 - decreased RNA level during mitotic G2 phase

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FYPO:0007049 - decreased RNA level during stress response to zinc ion

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FYPO:0003601 - decreased rRNA precursor level

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FYPO:0008251 - decreased silent mating-type cassette transcript-derived RNA level

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FYPO:0008424 - decreased silent mating-type cassette transcript-derived siRNA level

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FYPO:0004205 - decreased siRNA level

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FYPO:0004202 - decreased spliced cen-dg RNA level

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FYPO:0008247 - decreased subtelomeric heterochromatin RNA level

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FYPO:0004818 - decreased tDNA antisense small RNA level

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FYPO:0006848 - decreased total RNA level during vegetative growth

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FYPO:0003236 - decreased transposable element-derived small RNA level

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FYPO:0002585 - mature mitochondrial tRNA absent from cell

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FYPO:0004679 - polyadenylated 25S rRNA absent from cell

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FYPO:0004070 - RNA absent from cell during cellular response to copper ion starvation

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FYPO:0008156 - RNA absent from cell during cellular response to glucose starvation

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FYPO:0004052 - RNA absent from cell during cellular response to hydrogen peroxide

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FYPO:0007791 - RNA absent from cell during cellular response to magnesium starvation

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FYPO:0007794 - RNA absent from cell during cellular response to oxidative stress

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FYPO:0003162 - RNA absent from cell during cellular response to salt stress

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FYPO:0003644 - RNA absent from cell during cellular response to thiamine starvation

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FYPO:0003161 - RNA absent from cell during vegetative growth

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FYPO:0007010 - secondary siRNA absent from cell

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FYPO:0006076 - siRNA absent from cell

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