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Phenotype ontology term - FYPO:0001352 - abnormal chromatin organization during vegetative growth

Term summary

ID
FYPO:0001352
Name
abnormal chromatin organization during vegetative growth
Ontology or CV name
Phenotype
Definition
A cellular process phenotype in which any process of chromatin organization is abnormal in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.

Parents

Annotation

Multi-locus phenotype

FYPO:0001352 - abnormal chromatin organization during vegetative growth

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FYPO:0004308 - abnormal CENP-A containing chromatin organization

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FYPO:0005350 - abnormal chromatin organization resulting in peripheral chromatin distribution

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FYPO:0003044 - abnormal heterochromatin assembly

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FYPO:0004506 - abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution

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FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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FYPO:0004746 - abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat

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FYPO:0007224 - decreased heterochromatin assembly at centromere outer repeat during vegetative growth

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FYPO:0004491 - decreased nucleosome occupancy

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FYPO:0005951 - decreased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0007837 - decreased nucleosome occupancy at subtelomere

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FYPO:0005516 - decreased nucleosome occupancy in euchromatin

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FYPO:0007480 - decreased spatial extent of subtelomeric heterochromatin assembly

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FYPO:0005887 - ectopic CENP-A containing chromatin assembly

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FYPO:0005286 - heterochromatin assembly beyond boundary element IRC1L

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FYPO:0003045 - heterochromatin assembly beyond boundary element IRC1R

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FYPO:0008426 - increased heterochromatin assembly by siRNA

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FYPO:0004761 - increased histone exchange at pericentric heterochromatin

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FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0003410 - increased spatial extent of CENP-A containing chromatin assembly

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FYPO:0004948 - increased spatial extent of centromeric heterochromatin assembly

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FYPO:0004749 - increased spatial extent of subtelomeric heterochromatin assembly

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Single locus phenotype

FYPO:0001352 - abnormal chromatin organization during vegetative growth

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FYPO:0004308 - abnormal CENP-A containing chromatin organization

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FYPO:0007628 - abnormal chromatin organization during mitotic G2 phase

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FYPO:0007160 - abnormal DNA replication-dependent nucleosome assembly

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FYPO:0003044 - abnormal heterochromatin assembly

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FYPO:0003098 - abnormal heterochromatin assembly at centromere outer repeat during vegetative growth

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FYPO:0004506 - abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution

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FYPO:0005521 - abnormal nucleosome organization

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FYPO:0000853 - abnormal nucleosome positioning

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FYPO:0003812 - abnormal nucleosome positioning at stress response genes

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FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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FYPO:0000855 - abnormal nucleosome positioning in heterochromatin

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FYPO:0004746 - abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat

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FYPO:0007638 - decreased anisotropic motion of mitotic chromatin

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FYPO:0003740 - decreased CENP-A containing chromatin assembly

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FYPO:0007224 - decreased heterochromatin assembly at centromere outer repeat during vegetative growth

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FYPO:0004748 - decreased histone exchange at pericentric heterochromatin

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FYPO:0007004 - decreased histone exchange at protein coding gene during vegetative growth

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FYPO:0006997 - decreased histone exchange at silent mating-type cassette during vegetative growth

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FYPO:0006998 - decreased histone exchange at transposable element during vegetative growth

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FYPO:0004491 - decreased nucleosome occupancy

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FYPO:0005915 - decreased nucleosome occupancy at 5S rRNA genes

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FYPO:0005524 - decreased nucleosome occupancy at centromere central core

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FYPO:0005525 - decreased nucleosome occupancy at centromere inner repeat

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FYPO:0008151 - decreased nucleosome occupancy at centromeric heterochromatin

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FYPO:0005951 - decreased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0005931 - decreased nucleosome occupancy at silent mating-type cassette

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FYPO:0007837 - decreased nucleosome occupancy at subtelomere

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FYPO:0005916 - decreased nucleosome occupancy at tRNA genes

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FYPO:0005516 - decreased nucleosome occupancy in euchromatin

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FYPO:0008341 - decreased nucleosome occupancy in gene body

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FYPO:0006359 - decreased protein exchange at pericentric heterochromatin

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FYPO:0006370 - decreased protein exchange at subtelomeric heterochromatin

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FYPO:0004322 - decreased spatial extent of CENP-A containing chromatin assembly

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FYPO:0005849 - decreased spatial extent of heterochromatin assembly

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FYPO:0007891 - decreased spatial extent of mating-type region heterochromatin assembly

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FYPO:0007480 - decreased spatial extent of subtelomeric heterochromatin assembly

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FYPO:0005545 - decreased Tf body formation

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FYPO:0007270 - decreased Tf body tethering to centromere

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FYPO:0005887 - ectopic CENP-A containing chromatin assembly

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FYPO:0008035 - ectopic CENP-A containing chromatin assembly at pericentromeric heterochromatin

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FYPO:0005286 - heterochromatin assembly beyond boundary element IRC1L

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FYPO:0003045 - heterochromatin assembly beyond boundary element IRC1R

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FYPO:0003046 - heterochromatin assembly beyond boundary element IRC3L

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FYPO:0006985 - heterochromatin assembly beyond boundary element IRL

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FYPO:0003047 - heterochromatin assembly beyond boundary element IRR

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FYPO:0007517 - increased chromatin mobility

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FYPO:0008426 - increased heterochromatin assembly by siRNA

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FYPO:0004761 - increased histone exchange at pericentric heterochromatin

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FYPO:0007655 - increased nucleosome occupancy

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FYPO:0008036 - increased nucleosome occupancy at CENP-A boundary

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FYPO:0003909 - increased nucleosome occupancy at CRE site

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FYPO:0006309 - increased nucleosome occupancy at FLEX element

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FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

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FYPO:0006741 - increased nucleosome occupancy at MCB promoters

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FYPO:0007836 - increased nucleosome occupancy at subtelomere

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FYPO:0007656 - increased nucleosome occupancy at transcription start site

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FYPO:0006360 - increased protein exchange at pericentric heterochromatin

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FYPO:0003410 - increased spatial extent of CENP-A containing chromatin assembly

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FYPO:0004948 - increased spatial extent of centromeric heterochromatin assembly

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FYPO:0007953 - increased spatial extent of heterochromatin assembly

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FYPO:0006990 - increased spatial extent of heterochromatin assembly at protein coding gene

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FYPO:0004749 - increased spatial extent of subtelomeric heterochromatin assembly

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FYPO:0007271 - increased Tf body tethering to centromere

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