Phenotype ontology term - FYPO:0002335 - normal chromatin silencing
Term summary
- ID
- FYPO:0002335
- Name
- normal chromatin silencing
- Ontology or CV name
- Phenotype
- Definition
- A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).
Annotation
Multi-locus phenotype
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Single locus phenotype
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- ago1-F276A(aa)
- ccr4delta
- clr4delta
- djc9delta
- epe1delta
- hht3-K9M,K14R(K10M,K15R aa)
- leo1::Hermes(disruption)
- mlo3delta
- mot2delta
- nht1delta
- not2delta
- not3delta
- pmt3-KallR(K14R,K30R,K39R,K51R,K53R,K54R,K60R,K63R,K71R aa)
- rcd1delta
- tfs1delta
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- ada2delta
- alp14delta
- alp5-1134(S402N aa)
- ccq1delta
- chp1-E23V(aa)
- chp1-R923A,R924A(aa)
- chp1-V24M(aa)
- chp1-deltaRRM(311-407 Δaa)
- chp1delta
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- dfp1-3A(P448A,V450A,I452A aa)
- dfp1-CFP-2CD(dfp1-CFP-swi6(69-215)-swi6(69-215))
- dpb3delta
- dpb4-deltaC(132-210 Δaa)
- dpb4delta
- gcn5-E191Q(aa)
- gcn5delta
- hat1delta
- hht3-K9R(K10R aa)
- hif2delta
- hos2delta
- iec1delta
- ies4delta
- leo1::Hermes(disruption)
- man1delta
- mto1delta
- ngg1delta
- nse5delta
- pcf1-deltaWHD(478-544 Δaa)
- pdp3delta
- phi1delta
- poz1delta
- prp1-1(G705D aa)
- prp16-G515A(aa)
- prp2-1(unknown)
- prp3-3(unknown)
- prp4-73(C235Y aa)
- raf1-E388A,K389A(aa)
- raf1-deltaN(1-66 Δaa)
- rap1delta
- rpb2-N44A(aa)
- rpb2-N44Q(aa)
- rpb2-N44S(aa)
- rsc1delta
- set3-deltaSET(215-343 Δaa)
- sgf11delta
- sgf29delta
- sim3-143(G81E aa)
- sim3-205(E207K aa)
- snt1delta
- spd1delta
- spt16-1(unknown)[Knockdown]
- spt3delta
- spt7delta
- spt8delta
- ssa1delta
- ssa2delta
- sus1delta
- swi1delta
- swi6+(wild type)[Overexpression]
- tas3-W265A,G266A(aa)
- taz1delta
- teb1-1(R184C aa)
- trt1delta
- ubp8delta
- xdj1delta
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- SPBC215.06cdelta
- TerR-swi6-CD(TerR-swi6-CD(mating type localized))[Ectopic]
- ago1delta
- atf1-10A/I(S2A,S4A,T77A,S140A,S152A,S172A,T204I,T216I,S226A,T249I aa)[Ectopic]
- atf1-10A/I(S2A,S4A,T77A,S140A,S152A,S172A,T204I,T216I,S226A,T249I aa)
- atf1-4A/I(T77A,S115A,T204I,T249I aa)[Ectopic]
- atf1-4D/E(T77E,S115D,T204E,T249E aa)[Ectopic]
- atf1-6A/I(T77A,S115A,T166A,S172A,T204I,T249I aa)[Ectopic]
- atf1-6D/E(T77A,S115D,T166D,S172D,T204E,T249E aa)[Ectopic]
- atf1delta
- bqt4delta
- cbp1delta
- ccq1-1-31(W32*)
- chp1delta
- chp2-CSD2A(K321A,K322A aa)
- chp2-CSD3A(Q320A,K321A,K322A aa)
- chp2-H5A(K271A,R272A,R273A,R274A,R276A aa)
- clr3delta
- clr4delta
- clr6-1(G269D aa)
- ctf1delta
- dcr1delta
- djc9delta
- dri1delta
- epe1delta
- ers1delta
- eso1-W804G(aa)
- hat1delta
- hht3-K9R(K10R aa)
- hrk1delta
- hst4delta
- lem2delta
- man1delta
- mit1-FVI(epe1)(Mit1-CkIvV motif replaced by Epe1-FVI motif)
- mmi1delta
- mst2delta
- not2delta
- not3delta
- pcr1delta
- pdp3delta
- pht1delta
- psc3-4T(unknown)
- puf6delta
- rad21-K1(unknown)
- rae1-167(unknown)
- raf2delta
- rcd1delta
- rdp1delta
- res2delta
- rfp1delta
- rif1-S44N,1-398(S44N,I400*)
- rpb2-m203(N44Y aa)
- rss1delta
- saf1delta
- saf5delta
- sde2delta
- set1delta
- sgf73delta
- shf1delta
- smd3delta
- spd1delta
- ssu72-1-86(aa)
- stc1delta
- swd22-1-209(W210*)
- swi2delta
- swi6-115(W269R aa)
- tas3delta
- taz1-C215G(aa)
- tls1delta
- wee1delta
- wpl1delta
- xap5delta
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