Phenotype ontology term - FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette
Term summary
- ID
- FYPO:0002827
- Name
- decreased chromatin silencing at silent mating-type cassette
- Ontology or CV name
- Phenotype
- Definition
- A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.
Annotation
Multi-locus phenotype
References:
Genes:
Genotypes:
- ada2delta epe1+(wild type)[Overexpression]
- ago1+(wild type)[Overexpression] sgf73delta
- ago1delta atf1delta
- ago1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- ago1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- ago1delta pcr1delta
- ago1delta pds5delta
- amo1delta pob3delta
- amo1delta pob3delta swi6+(wild type)[Overexpression]
- amo1delta rix1-E414K(aa)
- amo1delta swi6+(wild type)[Overexpression]
- atf1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- atf1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- atf1delta dcr1delta
- atf1delta pcr1delta
- atf1delta rdp1delta
- atf1delta sty1delta
- caf1-(D53A,D243A,D174A aa) ccr4-H665A(H664A aa) dcr1delta
- caf1delta dcr1delta
- cdt2delta ddb1delta
- cdt2delta spd1delta
- chp1delta pcr1delta
- chp2+(wild type) swi6-115(W269R aa)
- chp2-I370E(aa)[Knockdown] chp2delta
- chp2-ch1(swi6(1-66)-chp2(159-380))[Knockdown] chp2delta
- chp2-ch2(chp2(1-160)-swi6(67-133)-chp2(229-380))[Overexpression] chp2delta
- chp2-ch3(chp2(1-230)-swi6(134-261)-chp2(315-380))[Overexpression] chp2delta
- chp2-ch4(chp2(1-316)-swi6(262-328))[Overexpression] chp2delta
- chp2delta clr3delta
- chp2delta swi6+(wild type)
- clr1-5(unknown) clr6-1(G269D aa)
- clr3-735(D232N aa) clr6-1(G269D aa)
- clr3-735(D232N aa) hrp3delta
- clr3-735(D232N aa) ino80-K873A(aa)
- clr3-735(D232N aa) rsc1delta snf22delta
- clr3-735(D232N aa) snf22delta
- clr3-735(D232N aa) swr1delta
- clr3delta clr5delta
- clr3delta clr6-1(G269D aa)
- clr3delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- clr3delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- clr3delta rsc1delta snf22delta
- clr3delta snf22delta
- clr4+(wild type)[Overexpression] sgf73delta
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa) pcr1delta
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa) pcr1delta
- clr4delta clr5delta
- clr4delta mit1-FVI(epe1)(Mit1-CkIvV motif replaced by Epe1-FVI motif)
- clr5-1058(W50*) swi6delta
- clr5-1059(R45A aa) swi6delta
- clr5delta swi6-115(W269R aa)
- clr6-1(G269D aa)[Knockdown] lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- clr6-1(G269D aa)[Knockdown] lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- dcr1+(wild type)[Overexpression] sgf73delta
- dcr1delta pcr1delta
- dcr1delta set1delta
- dcr1delta swi6-115(W269R aa)
- ddb1delta mst2delta
- ddb1delta paf1delta
- ddb1delta spd1delta
- epe1+(wild type)[Overexpression] gcn5delta
- epe1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- epe1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- eso1delta pds5delta
- eso1delta pds5delta wpl1delta
- eso1delta wpl1delta
- gcn5delta snf5-CDx2(Chromodomain fusion)
- leo1delta pob3delta
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown] sir2delta
- lsd2-deltaC(1165-1235 Δaa)[Knockdown] sir2delta
- lsd2-deltaC(1165-1235 Δaa) set1delta
- mit1-FVI(epe1)(Mit1-CkIvV motif replaced by Epe1-FVI motif) swi6delta
- mit1delta snf22delta
- mst2-CDx2(Chromodomain fusion) snf22delta
- mst2delta pob3delta
- pcr1delta rdp1delta
- pcr1delta sgf73delta
- pcr1delta tas3delta
- rix1-E414K(aa) swi6+(wild type)[Overexpression]
- snf22delta snf5-CDx2(Chromodomain fusion)
- snf22delta snf59-CDx2(Chromodomain fusion)
- swi6+(wild type)[Overexpression] swi7-H4(unknown)
- swi6-115(W269R aa) swi6-ch1(chp2(1-160)-swi6(67-328))
- swi6-115(W269R aa) swi6-ch2(swi6(1-66)-chp2(159-230)-swi6(134-328))[Overexpression]
- swi6-115(W269R aa) swi6-ch3(swi6(1-133)-chp2(229-316)-swi6(262-328))[Knockdown]
- swi6-115(W269R aa) swi6-ch4(swi6(1-261)-chp2(315-380))[Overexpression]
- swi6-L315E(aa)[Knockdown] swi6delta
Single locus phenotype
References:
Genes:
Genotypes:
- abo1delta
- ago1delta
- alp14delta
- amo1delta
- ani1delta
- apl5delta
- arb1delta
- asf1-1(C30F,D54N aa)
- atf1-10D/E(S2D,S4D,T77E,S140D,S152D,S172D,T204E,T216E,S226D,T249E aa)
- atf1delta
- bqt4delta
- caf1-D53A(aa)[Overexpression]
- ccr4delta
- cdt2delta
- chp1delta
- chp2+(wild type)[Overexpression]
- chp2-H5A+CSD2A(K271A,R272A,R273A,R274A,R276A,K321A,K322A aa)
- chp2-H5A+CSD3A(K271A,R272A,R273A,R274A,R276A,Q320A,K321A,K322A aa)
- chp2-W199A(aa)
- chp2delta
- cid14delta
- clr1-1(unknown)
- clr1-2(unknown)
- clr1-3(unknown)
- clr1-4(unknown)
- clr1-5(unknown)
- clr1-6(unknown)
- clr1delta
- clr2-760(unknown)
- clr2-E22(unknown)
- clr2-E376G(aa)
- clr2-H178G(aa)
- clr2-L142G(aa)
- clr2-L182G(aa)
- clr2-P137G(aa)
- clr2-R170G(aa)
- clr2-Y140G(aa)
- clr2delta
- clr3-735(D232N aa)
- clr3-E36(unknown)
- clr3-L511stop(L511*)
- clr3delta
- clr4-680(W487*)
- clr4-G378S(aa)
- clr4-G486D(aa)
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-P414H(aa)
- clr4-R320H(aa)
- clr4-S5(unknown)
- clr4-W31G(aa)
- clr4-W41G(aa)
- clr4-delta63-127(aa)
- clr4delta
- csn1delta
- csn2delta
- cul4-1(marker gene insertion at 3'-UTR)
- cul4delta
- dcr1delta
- ddb1delta
- dhm1delta
- dhm2delta
- dis3-54(P509L aa)
- dpb3delta
- epe1+(wild type)[Overexpression]
- fft3-C515F(aa)
- fft3delta
- gad8delta
- grc3-K344A(aa)[Overexpression]
- hht1-K14A(K15A aa)
- hht1-K9A(K10A aa)
- hht3-K9M(K10M aa)
- hip1delta
- hip3delta
- hip4delta
- hrp1delta
- hsp90-G84C(aa)
- lem2delta
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- man1delta
- mcl1-2(137-815 Δaa)
- mcm2-1(D87G,D112G aa)
- mcm2-2(D79V,D112G aa)
- meu6delta
- mit1-G985fs
- mit1-I11R(aa)
- mit1-K587A(aa)
- mit1delta
- mrc1-R558stop(558-1019 Δaa)
- mrc1delta
- msc1delta
- mto1delta
- nse5delta
- nup124delta
- nup40delta
- nup60delta
- nup61delta
- pcf1delta
- pcf2delta
- pcf3delta
- pcr1delta
- pds5delta
- pli1delta
- pob3delta
- pof3delta
- pol1-ts11(T840I aa)
- pol1-ts13(470-472 Δaa)
- pst1-1(W1305*)
- raf1-L387fs
- raf1delta
- raf2delta
- rdp1delta
- rik1-304(unknown)
- rik1delta
- rix1-E414K(aa)
- rpl2102delta
- rpl39delta
- rpl502delta
- rpn10delta
- set1delta
- set3delta
- shd1delta
- sin1delta
- sir2delta
- slm9delta
- slx8delta
- snf59-CDx2(Chromodomain fusion)
- sng1-(G159T nt)
- spc34delta
- spt16-1(unknown)
- spt6-1(856-919 Δaa)
- ste20delta
- sty1-Y173F(aa)
- sty1delta
- swi1-S28(unknown)
- swi1delta
- swi3-146(unknown)
- swi6-115(W269R aa)
- swi6-S115(unknown)
- swi6delta
- swi7-1(G1116E aa)
- swi7-H4(unknown)
- tas3delta
- tor1delta
- wis1-DD(S469D,T473D aa)[Overexpression]
- wis1delta
- yap18delta
