Phenotype ontology term - FYPO:0002909 - decreased protein localization to chromatin during vegetative growth
Term summary
- ID
- FYPO:0002909
- Name
- decreased protein localization to chromatin during vegetative growth
- Ontology or CV name
- Phenotype
- Definition
- A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased.
Annotation
Multi-locus phenotype
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- ago1delta atf1delta
- ago1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- ago1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- ago1delta clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- ago1delta pcr1delta
- atf1delta dcr1delta
- atf1delta rdp1delta
- chp1delta pcr1delta
- chp2delta mit1-FVI(epe1)(Mit1-CkIvV motif replaced by Epe1-FVI motif)
- dcr1delta pcr1delta
- pcr1delta rdp1delta
- pcr1delta tas3delta
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- ago1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- ago1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- ago1delta clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
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Single locus phenotype
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- SPCTRNAARG.10-TATA-less(T(-36)G,A(-35)C,T(-34)G,A(-33)C,T(-32)G,A(-31)C,T(-26)G,A(-25)C,T(-24)G,A(-23)C)
- ark1-as2(L166A,Q28R,Q176R aa)
- cdc18+(wild type)[Knockdown]
- cdc20-P7(unknown)
- cdc23-S424::TEV(cdc23(1-424)-(ENLYFQGAS)-cdc23(425-593))
- cdc23-tstd(Ub-DHFRts-cdc23-C239Y)
- cds1+(wild type)[Overexpression]
- cnd2-3A(S5A,S41A,S52A aa)
- cut3-477(S1147P aa)
- dbp2-i2delta(1397-2095 Δnt)
- dis2-11(R245Q aa)
- hht2-K56R(K57R aa)
- hrk1-pim(K8A,T9A,Y10A,G11A aa)
- hsk1-1312(S314I aa)
- hst4-4SA(S354A,S355A,S362A,S363A aa)
- lem2delta
- mrc1-S604A(aa)
- msc1delta
- mus81-deltaWH(117-214 Δaa)
- pds5-him(P84A,D85A,P87A aa)
- pho1-ncRNAdelta((-1200)-(-400))
- pht1+(wild type)[Knockdown]
- ppn1-deltaPP1-binding(V508A,W510A,V519A,F521A,V552A,F554A aa)
- ppn1delta
- rps2201delta
- rps2202-A>G(A46G nt)
- rps2202-idelta((-156)-(-10))
- swd22delta
- swi1delta
- swi3delta
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- ago1delta
- chp1-D48S,D51S(aa)
- chp1-E23V,V24M(aa)
- chp1-E23V(aa)
- chp1-F61A(aa)
- chp1-N59A(aa)
- chp1-V21A(aa)
- chp1-V24M(aa)
- chp1delta
- chp2delta
- ckb1delta
- clr3delta
- clr4delta
- cwf10-1(C324Y aa)
- dcr1delta
- ers1-C62(S234P aa)
- ers1delta
- hrk1-pim(K8A,T9A,Y10A,G11A aa)
- pds5-him(P84A,D85A,P87A aa)
- phi1delta
- pob3delta
- prp10-1(A1050V,S1058F aa)
- rdp1delta
- rhp6+(wild type)[Overexpression]
- seb1-1(A45G,T132A,G226A,T1384C,T1450A,A1514G,A1760G nt)
- sfh1-13(E225D,K254E,P292Q aa)
- snf21-36(V404A,E461K,S566L,I571V aa)
- swi6-115(W269R aa)
- swi6-S18-S117A(S18A,S24A,S46A,S52A,S117A aa)
- swi6delta
- tas3delta
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- rap1delta
- rif1-12D(S19D,T20D,S23A,S29D,S30D,S31D,S44D,S45D,S50D,T68D,S69D,T70D,S88D aa)
- rif1-7APP1(T20A,S23A,S31A,V41A,F43A,S45A,S50A,I65A,L66A,T70A,S88A aa)
- rif1-PP1(V41A,F43A,I65A,L66A aa)
- rif1delta
- sds21+(wild type)[Overexpression]
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- cdk9-T120G(aa)
- dis2delta
- gcn5-E191Q(aa)
- gcn5delta
- htb1-D67N(D68N aa)
- htb1-G52D(G53D aa)
- htb1-K119R(K120R aa)
- htb1-P102L(P103L aa)
- mcs6-L87G(aa)
- ncRNA-1343delta
- spt5-CTD-T1E(T818E,T827E,T836E,T845E,T854E,T863E,T872E,T881E,T890E,T899E,T908E,T917E,T925E,T939E,T952E,T963E,T971E aa)
- spt5-degron[Knockdown]
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- ago1-D580A(aa)
- ago1delta
- amo1delta
- caf1delta
- chp1-W44G(aa)
- chp1delta
- chp2+(wild type)[Overexpression]
- chp2delta
- clr3-735(D232N aa)
- clr3delta
- clr4-G378S(aa)
- clr4-G486D(aa)
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-R320H(aa)
- clr4-W31G(aa)
- clr4-W41G(aa)
- clr4delta
- cul4-1(marker gene insertion at 3'-UTR)
- dcr1delta
- dri1delta
- epe1+(wild type)[Overexpression]
- epe1-H297A(aa)
- hht2-K9R(K10R aa)
- mat1-Mc-(L7*)
- mit1-FVI(epe1)(Mit1-CkIvV motif replaced by Epe1-FVI motif)
- mot2delta
- msc1delta
- pcf1delta
- pcr1delta
- raf1-R576H(aa)[Knockdown]
- rdp1-D903A(aa)
- rdp1delta
- rik1-304(unknown)
- rik1delta
- set1delta
- shf1delta
- sir2delta
- swi2-5A(F271A,D272A,V274A,V275A,I276A aa)
- swi2-AT12-AA(G219A,R220A,P221A,G242A,R243A,P244A aa)
- swi6-(unknown)
- swi6-115(W269R aa)
- swi6delta
- swi7-1(G1116E aa)
- swi7-H4(unknown)
- tas3delta
- wis1-DD(S469D,T473D aa)[Overexpression]
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