Phenotype ontology term - FYPO:0003412 - decreased chromatin silencing at centromere outer repeat
Term summary
- ID
- FYPO:0003412
- Name
- decreased chromatin silencing at centromere outer repeat
- Ontology or CV name
- Phenotype
- Definition
- A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased.
Annotation
Multi-locus phenotype
References:
Genes:
Genotypes:
- ago1-intronless prp10-1(A1050V,S1058F aa)
- ago1delta iec1delta
- ago1delta ies4delta
- ago1delta iss1-deltaC38(327-344 Δaa)
- ago1delta leo1::Hermes(disruption)[Null]
- ago1delta lsd1-ao(K603A,K604A aa)
- ago1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- ago1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- ago1delta rap1delta
- alp13delta hrp3delta
- bdf2-BD1delta(234-336 Δaa) dcr1delta
- ccq1delta dcr1delta
- chp1delta chp2delta
- chp1delta chp2delta swi6delta
- chp1delta hht1-Y41F(Y42F aa) hht2-Y41F(Y42F aa) hht3-Y41F(Y42F aa)
- chp1delta swi6delta
- chp2delta swi6delta
- clr1-5(unknown) clr6-1(G269D aa)
- clr1delta lem2delta
- clr3+(wild type)[Overexpression] mcl1-101(P493S,L763F,A767V aa)
- clr3+(wild type)[Overexpression] mcl1-101(P493S,L763F,A767V aa) sir2+(wild type)[Overexpression]
- clr3-735(D232N aa) clr6-1(G269D aa)
- clr3delta dcr1delta
- clr3delta dcr1delta poz1delta
- clr3delta dcr1delta rap1delta
- clr3delta dcr1delta swi6+(wild type)[Overexpression]
- clr3delta lem2delta
- clr3delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- clr3delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- clr3delta pob3delta
- clr3delta poz1delta
- clr3delta rap1delta
- clr3delta swi6+(wild type)[Overexpression]
- clr4+(wild type)[Overexpression] ers1-C62(S234P aa)
- clr4-F449Y(aa) spt16-1(unknown)[Knockdown]
- clr4-R320H(aa) hrp3delta
- clr4delta dcr1delta
- clr4delta dcr1delta poz1delta
- clr4delta poz1delta
- clr4delta rap1delta
- clr4delta swi6+(wild type)[Overexpression]
- clr6-1(G269D aa)[Knockdown] lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- clr6-1(G269D aa)[Knockdown] lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- csi1delta lem2delta
- dcr1delta dpb4delta
- dcr1delta hrp1delta
- dcr1delta mcm2-2a(Y80A,Y89A aa)
- dcr1delta pot1delta
- dcr1delta poz1delta sir2delta
- dcr1delta sde2delta
- dcr1delta sir2delta
- dcr1delta sir2delta swi6+(wild type)[Overexpression]
- dcr1delta swi6delta
- dcr1delta tpz1delta
- dcr1delta trt1delta
- ddb1delta spd1delta
- dfp1-3A(P448A,V450A,I452A aa) swi6delta
- dfp1-CFP-2CD(dfp1-CFP-swi6(69-215)-swi6(69-215)) swi6delta
- dpb3delta sir2delta
- dpb4delta dri1delta
- dpb4delta sir2delta
- dsh1delta lem2delta
- epe1+(wild type)[Overexpression] gcn5delta
- epe1+(wild type)[Overexpression] sgf11delta
- epe1+(wild type)[Overexpression] spt3delta
- epe1+(wild type)[Overexpression] spt8delta
- epe1+(wild type)[Overexpression] tra1delta
- epe1+(wild type)[Overexpression] ubp8delta
- epe1-H297A(aa)[Overexpression] gcn5delta
- epe1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- epe1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- ers1-C62(S234P aa) hrr1+(wild type)[Overexpression]
- fft3delta spt16-1(unknown)[Knockdown]
- hht1-K14R(K15R aa) hht3-K9M(K10M aa)
- hht1-S10D(S11D aa) hht3-K9M(K10M aa)
- hht2+(wild type)[Overexpression] hht3-K9M(K10M aa)
- hrr1-intronless prp10-1(A1050V,S1058F aa)
- lem2delta nur1delta
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown] sir2delta
- lsd2-deltaC(1165-1235 Δaa)[Knockdown] sir2delta
- mcl1-101(P493S,L763F,A767V aa) sir2+(wild type)[Overexpression]
- mkt1delta sir2delta
- msc1delta swi6delta
- poz1delta swi6delta
- rad25+(wild type)[Overexpression] rss1delta
- rad25delta rss1delta
- raf1+(wild type)[Overexpression] set3delta
- rap1delta rdp1delta
- rap1delta swi6delta
- rss1+(wild type)[Overexpression] sir2delta
- rss1delta sir2delta
References:
Genes:
Genotypes:
Single locus phenotype
References:
Genes:
Genotypes:
- SPAC144.05::Tn-seq(irc20::Tn-seq)
- SPAC24B11.05::Tn-seq
- SPAC30D11.14c::Tn-seq
- SPAC3H8.08c::Tn-seq
- SPAC56E4.03::Tn-seq
- SPAC694.04c::Tn-seq
- SPAC806.06c::Tn-seq
- SPAC9.02c::Tn-seq
- SPAP8A3.07c::Tn-seq
- SPBC11C11.05::Tn-seq(knh1::Tn-seq)
- SPBC28E12.04::Tn-seq(cbp7::Tn-seq)
- SPBC30D10.14::Tn-seq
- SPBC577.03c::Tn-seq
- SPCC569.05c::Tn-seq
- SPCC613.01::Tn-seq_
- SPCC63.06::Tn-seq
- abo1delta
- abz2::Tn-seq
- ago1-3A(F276A,Y513A,K517A aa)
- ago1-D580A(aa)
- ago1-D651A(aa)
- ago1-F276A(aa)
- ago1-H788A(aa)
- ago1::Tn-seq
- ago1delta
- ags1::Tn-seq
- alp13delta
- ani1::Tn-seq
- ani2::Tn-seq
- any2::Tn-seq
- arb1delta
- arb2delta
- aro1::Tn-seq
- asf1-1(C30F,D54N aa)
- byr3::Tn-seq
- caf1delta
- cat1::Tn-seq
- cat1delta
- cbp3::Tn-seq
- cbr1::Tn-seq
- cdr1::Tn-seq
- cdr2::Tn-seq
- cdt2delta
- chp1(1-409)(410-960 Δaa)
- chp1-E23V,V24M(aa)
- chp1-V24R(aa)
- chp1-W44A(aa)
- chp1-alpha-mut1(KKRKK71NEHG aa)
- chp1::Tn-seq
- chp1delta
- chp1deltaCD(2-79)(aa)
- chp1deltaCD(20-75)(aa)
- chp2-TAP(C-terminal TAP tagging)
- chp2delta
- cid12delta
- cki3::Tn-seq
- clr1-5(unknown)
- clr1delta
- clr2::Tn-seq
- clr2delta
- clr3-735(D232N aa)
- clr3delta
- clr4-3FA(F256A,F310A,F427A aa)
- clr4-F449Y(aa)
- clr4-GS253(D253G,P254G,N255S,F256G aa)
- clr4-Y451N(aa)
- clr4-alpha-mut(KRRKR58NEHG aa)
- clr4delta
- clr6-1(G269D aa)
- cop1::Tn-seq
- cos1-17(V233A aa)
- cos1-22(A574D aa)
- cos1-38(G622E aa)
- cos1-7(G242R aa)
- cos1-86(Q765*)
- cox1102::Tn-seq
- cpc2::Tn-seq
- csn1delta
- csn2delta
- cul4-2(unknown)
- cul4-3(unknown)
- cul4delta
- cwf10-1(C324Y aa)
- cwf11::Tn-seq
- cwf2::Tn-seq
- cyc2::Tn-seq
- dbl8::Tn-seq
- dcr1-5(D908A,D1127A aa)
- dcr1-SHSS(C1275S,C1350S,C1352S aa)
- dcr1::Tn-seq
- dcr1delta
- ddb1delta
- dis3-54(P509L aa)
- dpb3-6A(L10A,I18A,L35A,F43A,L47A,F80A aa)
- dpb3::Tn-seq
- dpb3delta
- dpb4-deltaHF(17-80 Δaa)
- dpb4delta
- dri1delta
- drp1::Tn-seq
- dsh1::Tn-seq
- dsh1delta
- dus3::Tn-seq
- dus3delta
- enp1::Tn-seq
- epe1+(wild type)[Overexpression]
- epe1-H297A(aa)[Overexpression]
- epe1-deltaFVI(566-577 Δaa)
- epe1delta
- ers1-C62(S234P aa)
- ers1::Tn-seq
- ers1delta
- etr1::Tn-seq
- faf1::Tn-seq
- fep1::Tn-seq
- fft3delta
- fip1::Tn-seq
- fub2::Tn-seq
- fyu1::Tn-seq
- gar2::Tn-seq
- gly1::Tn-seq
- grt1::Tn-seq
- hca4::Tn-seq
- hht1-K9M(K10M aa)
- hht2-K9M(K10M aa)
- hht3-K9M(K10M aa)
- hip1delta
- hip3delta
- hip4delta
- hpt1::Tn-seq
- hpt1delta
- hrp1::Tn-seq
- hrp1delta
- hsp-tev-2(hsp90-tev-2)
- hsp104delta
- hsp90-A4(R33C aa)
- hsp90-G84C(aa)
- hst2delta
- hst4delta
- hta2::Tn-seq
- idh2::Tn-seq
- ino80::Tn-seq
- iss1-deltaC38(327-344 Δaa)
- iss1::Tn-seq
- its8::Tn-seq
- jmj3::Tn-seq
- kap104::Tn-seq
- kap111::Tn-seq
- kap114::Tn-seq
- kin1::Tn-seq
- krs1::Tn-seq
- lem2delta
- lid2-H542A(aa)
- lid2::Tn-seq
- lkh1::Tn-seq
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- mak2::Tn-seq
- mak2delta
- mas5delta
- mcl1-101(P493S,L763F,A767V aa)
- mcl1delta
- mcm2-2a(Y80A,Y89A aa)
- mcs2::Tn-seq
- mdm31::Tn-seq
- med1::Tn-seq
- med20::Tn-seq
- med20delta
- mef1::Tn-seq
- mex67::Tn-seq
- mit1-K587A(aa)
- mit1-deltaCD(unknown)
- mit1::Tn-seq
- mit1delta
- mit1deltaPHD(unknown)
- mkt1delta
- mlo2::Tn-seq
- mmf2::Tn-seq
- mrc1::Tn-seq
- mrt4::Tn-seq
- msi2::Tn-seq
- ned1::Tn-seq
- nhp6::Tn-seq
- noc1::Tn-seq
- noc201::Tn-seq
- nog1::Tn-seq
- nop2::Tn-seq
- nop4::Tn-seq
- nop58::Tn-seq
- nup155::Tn-seq
- nup45::Tn-seq
- nur1delta
- nxt1::Tn-seq
- oga1::Tn-seq
- pas1::Tn-seq
- pcf1-ED*(Y340A,W348A aa)
- pcf1-KER*(R147E,K150E,K154E,R161E,K168E aa)
- pcf1-PIPmut(Q172A,L175A,F178A,F179A aa)
- pcf2::Tn-seq
- pet1::Tn-seq
- pfd1::Tn-seq
- pgi1::Tn-seq
- pha2::Tn-seq
- pli1delta
- pob3::Tn-seq
- pob3delta
- pof3delta
- pot1delta
- prp10-1(A1050V,S1058F aa)
- prp11::Tn-seq
- prp12-1(G3340A nt)
- prp16-2(Q140*)
- prp16-F528S(aa)
- prp31::Tn-seq
- prp39-1(unknown)
- prp5-1(unknown)
- prp8-1(unknown)
- prw1::Tn-seq
- prw1delta
- pss1::Tn-seq
- pub2::Tn-seq
- pub2delta
- puf1::Tn-seq
- puf6::Tn-seq
- put2::Tn-seq
- pyp2::Tn-seq
- rad25delta
- raf1delta
- raf2delta
- rbm10delta
- rdp1::Tn-seq
- rdp1delta
- res2::Tn-seq
- ria1::Tn-seq
- rik1-304(unknown)
- rik1::Tn-seq
- rik1delta
- rkr1::Tn-seq
- rlc1::Tn-seq
- rna14::Tn-seq
- rod1::Tn-seq
- rpb1::Tn-seq
- rpb2-m203(N44Y aa)
- rpb8::Tn-seq
- rpl1502::Tn-seq
- rpl1702::Tn-seq
- rpl1802::Tn-seq
- rpl1902::Tn-seq
- rpl2102::Tn-seq
- rpl2301::Tn-seq
- rpl2401::Tn-seq
- rpl2402::Tn-seq
- rpl2502::Tn-seq
- rpl2801::Tn-seq
- rpl29::Tn-seq
- rpl3602::Tn-seq
- rpl402::Tn-seq
- rpl4302::Tn-seq
- rpl502::Tn-seq
- rpl702::Tn-seq
- rpl803::Tn-seq
- rpm1::Tn-seq
- rpp21::Tn-seq
- rpt2::Tn-seq
- rpt3-1(Q384*)
- rpt6::Tn-seq
- rrp41::Tn-seq
- rrp9::Tn-seq
- rss1-deltaC(112-131 Δaa)[Knockdown]
- rss1-deltaN(1-9 Δaa)[Knockdown]
- rss1delta
- saf1delta
- saf3::Tn-seq
- saf5delta
- san1::Tn-seq
- sap49::Tn-seq
- sde2delta
- sds21::Tn-seq
- set2::Tn-seq
- set3-deltaPHD(5-49 Δaa)
- set3delta
- sfc7::Tn-seq
- sgf11::Tn-seq
- sgf73delta
- sif2::Tn-seq
- sif3::Tn-seq
- sir2::Tn-seq
- sir2delta
- skb15::Tn-seq
- slm9delta
- smd2::Tn-seq
- smd3delta
- snd302::Tn-seq
- snt2::Tn-seq
- spc25::Tn-seq
- spt16-1(unknown)[Knockdown]
- spt16::Tn-seq
- spt6-K20(708-789 Δaa)
- spt6delta
- srb8::Tn-seq
- srp2::Tn-seq
- ssr4delta
- stc1delta
- stt4::Tn-seq
- swi6-115(W269R aa)
- swi6::Tn-seq
- swi6delta
- swi7-1(G1116E aa)
- swi7-H4(unknown)
- sxa1::Tn-seq
- taf1::Tn-seq
- taf4::Tn-seq
- taf7::Tn-seq
- tas3-W265A,G266A(aa)
- tas3::Tn-seq
- tas3delta
- tea4::Tn-seq
- tfa1::Tn-seq
- tfb1::Tn-seq
- tif313::Tn-seq
- tif5::Tn-seq
- tom40::Tn-seq
- tos4::Tn-seq
- tpz1delta
- trk1::Tn-seq
- trm6::Tn-seq(gcd10::Tn-seq)
- trm732::Tn-seq
- trm7::Tn-seq
- uaf2::Tn-seq
- ubc13::Tn-seq
- ubp14::Tn-seq
- ubp3::Tn-seq
- ubp8::Tn-seq
- ura1::Tn-seq
- ura2::Tn-seq
- ura3::Tn-seq
- urh2::Tn-seq
- vma3::Tn-seq
- vms1::Tn-seq
- vps26::Tn-seq
- vps4::Tn-seq
- vtc2::Tn-seq
- wee1delta
- wtf13::Tn-seq
- ysh1::Tn-seq
- zas1::Tn-seq
References:
Genes:
Genotypes:
