Phenotype ontology term - FYPO:0004689 - increased cenH-derived RNA level
Term summary
- ID
- FYPO:0004689
- Name
- increased cenH-derived RNA level
- Ontology or CV name
- Phenotype
- Definition
- A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.
Annotation
Multi-locus phenotype
References:
Genes:
Genotypes:
- ago1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- ago1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- ago1delta clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4delta moc3delta
- clr4delta php2delta
- clr4delta php5delta
Single locus phenotype
References:
Genes:
Genotypes:
- ash2delta
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4delta
- epe1+(wild type)[Overexpression]
- lsd1-deltaC(934-1000 Δaa)[Knockdown]
- lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- sdc1delta
- set1-F(set1-3xFLAG)
- set1-RRM1delta(RRM1 domain deletion)[Knockdown]
- set1-SET(SET domain delta)
- set1-nSETdelta(nSET domain deletion)[Knockdown]
- set1-pSETdelta(pSET domain deletion)
- set1delta
- spf1delta
- swd1delta
- swd2delta
- swd3delta
