Phenotype ontology term - FYPO:0007373 - abnormal histone methylation at silent mating-type cassette during vegetative growth
Term summary
- ID
- FYPO:0007373
- Name
- abnormal histone methylation at silent mating-type cassette during vegetative growth
- Ontology or CV name
- Phenotype
- Definition
- A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.
Annotation
Multi-locus phenotype
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- ago1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- ago1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- ago1delta clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- atf1delta clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- caf1delta dcr1delta
- clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa) pcr1delta
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- ago1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- ago1delta lsd2-ao(K823A,K824A aa)
- ago1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- atf1delta clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- atf1delta clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- atf1delta dcr1delta
- atf1delta dsh1delta
- cid14delta swi6delta
- clr3delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- clr3delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa) pcr1delta
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa) pcr1delta
- epe1delta lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- epe1delta lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown] sir2delta
- lsd2-deltaC(1165-1235 Δaa)[Knockdown] sir2delta
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Single locus phenotype
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Genotypes:
- clr4-IDR-Mut3(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q,K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- cul4delta
- dcr1delta
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- caf1delta
- clr3delta
- clr4-F449Y(aa)
- clr4-I418P(aa)
- clr4-IDR-Mut1(R85Q,K87Q,K94Q,R98Q,R101Q,R104Q aa)
- clr4-IDR-Mut2(K109Q,K110Q,K113Q,K114Q,K122Q,R123Q,R126Q,K127Q aa)
- clr4-W31G(aa)
- clr4-delta63-127(aa)
- clr4delta
- cul4-1(marker gene insertion at 3'-UTR)
- cut4-(unknown)
- cut9-665(A535T aa)
- hht1-K14A(K15A aa)
- hht1-K14R(K15R aa)
- hht1-K9A(K10A aa)
- hht3+(wild type)/hht3-K9M(K10M aa)
- hht3-K9M(K10M aa)
- lsd1-deltaHMG(841-1000 Δaa)[Knockdown]
- lsd2-deltaC(1165-1235 Δaa)[Knockdown]
- mot2-C37A(aa)[Overexpression]
- mot2delta
- nuc2-(unknown)
- pds5delta
- raf1delta
- raf2delta
- rrp6delta
- set3delta
- shf1delta
- swi6delta
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