GO cellular component ontology term - GO:0000792 - heterochromatin
Term summary
ID
GO:0000792
Name
heterochromatin
Ontology or CV name
GO cellular component
Definition
A compact and highly condensed form of chromatin that is refractory to transcription.
Parents
is_a
chromatin
Annotation
GO cellular component
GO:0000792
-
heterochromatin
References:
GO_REF:0000050
PMID:11069763
PMID:16168376
PMID:16762840
PMID:17449867
PMID:17948055
PMID:21385875
PMID:23084836
PMID:25798942
PMID:26438724
PMID:27538348
PMID:28934464
PMID:29214404
PMID:31468675
PMID:38285941
Genes:
atf1 (SPBC29B5.01)
cnd2 (SPCC306.03c)
crb3 (SPAC13G7.08c)
epe1 (SPCC622.16c)
fft3 (SPAC25A8.01c)
hht1 (SPAC1834.04)
hht2 (SPBC8D2.04)
hht3 (SPBC1105.11c)
hos2 (SPAC3G9.07c)
hus5 (SPAC30D11.13)
ipi1 (SPCC1393.06c)
las1 (SPBC16C6.12c)
man1 (SPAC14C4.05c)
mcl1 (SPAPB1E7.02c)
mcm2 (SPBC4.04c)
nup85 (SPBC17G9.04c)
php2 (SPBC725.11c)
pku70 (SPCC126.02c)
rix1 (SPCC4G3.18)
rst2 (SPAC6F12.02)
set3 (SPAC22E12.11c)
spt2 (SPCC1393.02c)
swi6 (SPAC664.01c)
GO:0000792
-
heterochromatin
References:
PMID:27538348
Genes:
hos2 (SPAC3G9.07c)
GO:1990342
-
heterochromatin island
References:
PMID:16762840
PMID:22144463
PMID:24210919
PMID:24713849
PMID:26942678
PMID:31269446
Genes:
ago1 (SPCC736.11)
chp1 (SPAC18G6.02c)
clr3 (SPBC800.03)
epe1 (SPCC622.16c)
erh1 (SPAC19G12.17)
iss1 (SPAC22G7.10)
mis4 (SPAC31A2.05c)
mit1 (SPBP35G2.10)
mmi1 (SPCC736.12c)
mtl1 (SPAC17H9.02)
rad21 (SPCC338.17c)
raf2 (SPCC970.07c)
red1 (SPAC1006.03c)
rrp6 (SPAC1F3.01)
swi6 (SPAC664.01c)
GO:0031934
-
mating-type region heterochromatin
References:
PMID:11283354
PMID:11780129
PMID:12511578
PMID:15372076
PMID:15475954
PMID:15537537
PMID:15607976
PMID:15615848
PMID:15743828
PMID:16079916
PMID:16246721
PMID:16762840
PMID:17289569
PMID:17304215
PMID:17371846
PMID:17446861
PMID:18345014
PMID:18354497
PMID:18809570
PMID:18957202
PMID:19965387
PMID:20661445
PMID:20929775
PMID:21385875
PMID:31278118
PMID:39747188
PMID:39786922
PMID:7660126
Genes:
ago1 (SPCC736.11)
cbp1 (SPBC1105.04c)
chp1 (SPAC18G6.02c)
chp2 (SPBC16C6.10)
cid12 (SPCC663.12)
clr1 (SPBC2D10.17)
clr2 (SPAC1B3.17)
clr3 (SPBC800.03)
clr4 (SPBC428.08c)
cul4 (SPAC3A11.08)
epe1 (SPCC622.16c)
grc3 (SPCC830.03)
hht1 (SPAC1834.04)
hht2 (SPBC8D2.04)
hht3 (SPBC1105.11c)
hrk1 (SPAC23C4.03)
hrr1 (SPCC1739.03)
hst2 (SPCC132.02)
hst4 (SPAC1783.04c)
hta1 (SPCC622.08c)
hta2 (SPAC19G12.06c)
lid2 (SPBP19A11.06)
lsd1 (SPBC146.09c)
lsd2 (SPAC23E2.02)
mit1 (SPBP35G2.10)
moc3 (SPAC821.07c)
obr1 (SPAC3C7.14c)
pds5 (SPAC110.02)
phf1 (SPCC4G3.07c)
phf2 (SPAC30D11.08c)
php3 (SPAC23C11.08)
psc3 (SPAC17H9.20)
raf1 (SPCC613.12c)
raf2 (SPCC970.07c)
rdp1 (SPAC6F12.09)
rik1 (SPCC11E10.08)
sfr1 (SPBC28F2.07)
sir2 (SPBC16D10.07c)
slx8 (SPBC3D6.11c)
swi2 (SPAC1142.03c)
swi5 (SPBC409.03)
swi6 (SPAC664.01c)
tas3 (SPBC83.03c)
GO:0005721
-
pericentric heterochromatin
References:
PMID:10440376
PMID:10766735
PMID:11283354
PMID:11553715
PMID:11598020
PMID:11780129
PMID:12526748
PMID:14730319
PMID:15372076
PMID:15475954
PMID:15607976
PMID:15615848
PMID:15743828
PMID:15947136
PMID:16079916
PMID:16762840
PMID:17289569
PMID:17371846
PMID:17446861
PMID:18345014
PMID:18809570
PMID:18948543
PMID:18957202
PMID:19117951
PMID:19965387
PMID:20211136
PMID:20299449
PMID:20661445
PMID:20929775
PMID:21151114
PMID:21385875
PMID:21725325
PMID:21844224
PMID:22474355
PMID:22895252
PMID:23084836
PMID:25847133
PMID:26446992
PMID:26744419
PMID:30573453
PMID:31278118
PMID:39747188
Genes:
ago1 (SPCC736.11)
bir1 (SPCC962.02c)
chp1 (SPAC18G6.02c)
chp2 (SPBC16C6.10)
cid12 (SPCC663.12)
clr1 (SPBC2D10.17)
clr2 (SPAC1B3.17)
clr3 (SPBC800.03)
clr4 (SPBC428.08c)
cul4 (SPAC3A11.08)
cut4 (SPBC106.09)
cut9 (SPAC6F12.15c)
cwf10 (SPBC215.12)
dcr1 (SPCC188.13c)
dsh1 (SPBC582.04c)
epe1 (SPCC622.16c)
ers1 (SPCC1393.05)
gcn5 (SPAC1952.05)
grc3 (SPCC830.03)
hht1 (SPAC1834.04)
hht2 (SPBC8D2.04)
hht3 (SPBC1105.11c)
hrk1 (SPAC23C4.03)
hrr1 (SPCC1739.03)
hst2 (SPCC132.02)
hst4 (SPAC1783.04c)
hta1 (SPCC622.08c)
hta2 (SPAC19G12.06c)
lem2 (SPAC18G6.10)
lid2 (SPBP19A11.06)
lsd1 (SPBC146.09c)
lsd2 (SPAC23E2.02)
mit1 (SPBP35G2.10)
mms19 (SPAC1071.02)
moc3 (SPAC821.07c)
mst1 (SPAC637.12c)
nse4 (SPBC20F10.04c)
pds5 (SPAC110.02)
phf1 (SPCC4G3.07c)
phf2 (SPAC30D11.08c)
php2 (SPBC725.11c)
php3 (SPAC23C11.08)
php5 (SPBC3B8.02)
pku70 (SPCC126.02c)
psc3 (SPAC17H9.20)
pst1 (SPBC12C2.10c)
rad21 (SPCC338.17c)
raf1 (SPCC613.12c)
raf2 (SPCC970.07c)
rdp1 (SPAC6F12.09)
rec8 (SPBC29A10.14)
rik1 (SPCC11E10.08)
rpb2 (SPAC23G3.01)
sgo1 (SPBP35G2.03c)
sgo2 (SPAC15A10.15)
sir2 (SPBC16D10.07c)
spt6 (SPAC1F7.01c)
spt7 (SPBC25H2.11c)
stc1 (SPBP8B7.28c)
swi6 (SPAC664.01c)
tas3 (SPBC83.03c)
GO:0033553
-
rDNA heterochromatin
References:
PMID:16079916
PMID:17289569
PMID:17446861
PMID:18345014
PMID:20661445
PMID:21633354
PMID:25847133
PMID:26446992
PMID:26942678
PMID:27035982
PMID:27185885
PMID:27451393
Genes:
brc1 (SPBC582.05c)
clr1 (SPBC2D10.17)
clr2 (SPAC1B3.17)
clr3 (SPBC800.03)
cnd2 (SPCC306.03c)
erh1 (SPAC19G12.17)
hst2 (SPCC132.02)
hst4 (SPAC1783.04c)
hta1 (SPCC622.08c)
hta2 (SPAC19G12.06c)
lem2 (SPAC18G6.10)
mit1 (SPBP35G2.10)
nse4 (SPBC20F10.04c)
pfh1 (SPBC887.14c)
rad21 (SPCC338.17c)
raf2 (SPCC970.07c)
reb1 (SPBC1198.11c)
rik1 (SPCC11E10.08)
sir2 (SPBC16D10.07c)
GO:0030958
-
RITS complex
References:
PMID:14704433
PMID:17531816
PMID:22081013
Genes:
ago1 (SPCC736.11)
chp1 (SPAC18G6.02c)
tas3 (SPBC83.03c)
GO:0140720
-
subtelomeric heterochromatin
References:
PMID:15372076
PMID:15475954
PMID:15615848
PMID:15743828
PMID:16079916
PMID:16762840
PMID:17289569
PMID:17371846
PMID:18345014
PMID:18809570
PMID:20929775
PMID:32269268
PMID:7660126
Genes:
ago1 (SPCC736.11)
chp1 (SPAC18G6.02c)
chp2 (SPBC16C6.10)
clr2 (SPAC1B3.17)
clr3 (SPBC800.03)
clr4 (SPBC428.08c)
cul4 (SPAC3A11.08)
epe1 (SPCC622.16c)
hht1 (SPAC1834.04)
hht2 (SPBC8D2.04)
hht3 (SPBC1105.11c)
hrk1 (SPAC23C4.03)
lsd1 (SPBC146.09c)
lsd2 (SPAC23E2.02)
mit1 (SPBP35G2.10)
phf1 (SPCC4G3.07c)
phf2 (SPAC30D11.08c)
psc3 (SPAC17H9.20)
raf1 (SPCC613.12c)
raf2 (SPCC970.07c)
rdp1 (SPAC6F12.09)
rik1 (SPCC11E10.08)
sir2 (SPBC16D10.07c)
swi6 (SPAC664.01c)
tas3 (SPBC83.03c)