GO molecular function ontology term - GO:0019843 - rRNA binding
Term summary
ID
GO:0019843
Name
rRNA binding
Ontology or CV name
GO molecular function
Definition
Binding to a ribosomal RNA.
Parents
is_a
RNA binding
Annotation
GO molecular function
GO:0019843
-
rRNA binding
References:
GO_REF:0000002
GO_REF:0000024
GO_REF:0000033
GO_REF:0000050
GO_REF:0000111
PMID:10502409
Genes:
brx1 (SPBC800.06)
cbf5 (SPAC29A4.04c)
imp3 (SPAC19D5.05c)
mra1 (SPAC18G6.07c)
mrpl16 (SPBC1105.03c)
mrpl6 (SPAC12G12.08)
nam9 (SPBC13G1.01c)
nhp2 (SPAC1782.10c)
nop10 (SPAP27G11.13c)
nop6 (SPBC365.04c)
rpf2 (SPAC926.08c)
rpl2501 (SPBC106.18)
rpl2502 (SPBC4F6.04)
rpl35A02 (SPBC1921.01c)
rpl3702 (SPCC1223.05c)
rpl3703 (SPAPB17E12.05)
rpl801 (SPAC1F7.13c)
rpl802 (SPBC2F12.07c)
rpl803 (SPBC839.04)
rpl901 (SPAC4G9.16c)
rpl902 (SPCC613.06)
rps1802 (SPCC1259.01c)
rps901 (SPAC24H6.07)
rps902 (SPBC29A3.12)
rrp17 (SPAC29A4.09)
snu3 (SPSNRNA.03)
snu32 (SPSNRNA.07)
tif310 (SPAC3A12.13c)
utp25 (SPCC1827.01c)
SPAC1B9.03c
GO:0008097
-
5S rRNA binding
References:
GO_REF:0000033
PMID:12087160
Genes:
rpl501 (SPAC3H5.12c)
rpl502 (SPBC11C11.09c)
rrp16 (SPAC22F8.09)
sfc2 (SPAC144.09c)
GO:0070180
-
large ribosomal subunit rRNA binding
References:
GO_REF:0000033
Genes:
mrpl19 (SPAC1486.07c)
mrpl38 (SPBC887.07)
rpl1201 (SPCC16C4.13c)
rpl1202 (SPCC31H12.04c)
rpl2301 (SPAC3G9.03)
rpl2302 (SPCC1322.11)
rpp0 (SPCC18.14c)
GO:0030562
-
rRNA 2'-O-ribose methylation guide activity
References:
GO_REF:0000024
PMID:17222800
PMID:40185772
Genes:
snR107 (SPSNORNA.55)
snR88 (SPSNORNA.53)
sno52 (SPSNORNA.29)
snoR61 (SPNCRNA.445)
snoZ3 (SPSNORNA.06)
snoZ4 (SPSNORNA.05)
snoZ5 (SPSNORNA.04)
snoZ7 (SPSNORNA.03)
snoZ8 (SPSNORNA.02)
GO:0042134
-
rRNA primary transcript binding
References:
GO_REF:0000002
GO_REF:0000024
GO_REF:0000033
PMID:37913773
Genes:
imp4 (SPAC19A8.07c)
rmp1 (SPAC323.08)
rpf1 (SPAC4F8.04)
rrp5 (SPCC1183.07)
snR30 (SPSNORNA.20)
tor2 (SPBC216.07c)
GO:0030559
-
rRNA pseudouridylation guide activity
References:
PMID:15716270
Genes:
snR10 (SPSNORNA.37)
snR3 (SPSNORNA.35)
snR33 (SPSNORNA.38)
snR36 (SPSNORNA.39)
snR42 (SPSNORNA.40)
snR90 (SPSNORNA.42)
snR91 (SPSNORNA.43)
snR92 (SPSNORNA.44)
snR93 (SPSNORNA.45)
snR94 (SPSNORNA.46)
GO:0070181
-
small ribosomal subunit rRNA binding
References:
GO_REF:0000033
Genes:
mrp17 (SPAC343.08c)
rsm18 (SPCC18B5.04)
utp23 (SPCC18.12c)